STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00002600Putative plastid-lipid-associated protein 7, chloroplastic. (287 aa)    
Predicted Functional Partners:
CKAN_02066700
Plastid-lipid associated protein PAP / fibrillin family protein isoform 1.
      
 0.514
CKAN_01525000
Polyprenyl synthetase.
    
 
 0.457
CKAN_01813100
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
    
 
 0.457
CKAN_01962700
Putative plastid-lipid-associated protein 12, chloroplastic isoform X1.
      
0.437
CKAN_01856000
Putative plastid-lipid-associated protein 10, chloroplastic.
      
 0.431
CKAN_00307100
Saccharopine dehydrogenase isoform 2.
  
   
 0.430
CKAN_01160500
Putative plastid-lipid-associated protein 13, chloroplastic.
      
 0.418
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.