STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00031400Haloacid dehalogenase-like hydrolase domain-containing protein isoform X1. (333 aa)    
Predicted Functional Partners:
CKAN_02572300
Bifunctional riboflavin kinase/FMN phosphatase-like protein.
  
  
0.894
CKAN_00847000
Serine--glyoxylate aminotransferase.
    
 0.763
CKAN_00302000
Serine--glyoxylate aminotransferase.
    
 0.763
CKAN_00331500
Alpha-D-phosphohexomutase superfamily.
  
 0.757
CKAN_01621500
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
   
 0.750
CKAN_01273600
Alpha-D-phosphohexomutase superfamily.
  
 0.750
CKAN_01677100
ATP phosphoribosyltransferase HisG.
    
 0.744
CKAN_02314100
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
   
 0.744
CKAN_00316800
Glutamine--fructose-6-phosphate aminotransferase isomerizing 2 isoform X1.
    
 0.740
CKAN_00831800
Glutamine--fructose-6-phosphate aminotransferase isomerizing 2 isoform X1.
    
 0.740
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.