Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00137900 | CKAN_00141400 | A0A3S3M4J4 | A0A3S3PUN0 | Putative nuclease HARBI1. | L10-interacting MYB domain-containing protein. | 0.440 |
CKAN_00141400 | CKAN_00137900 | A0A3S3PUN0 | A0A3S3M4J4 | L10-interacting MYB domain-containing protein. | Putative nuclease HARBI1. | 0.440 |
CKAN_00141400 | CKAN_00576400 | A0A3S3PUN0 | A0A443NFL2 | L10-interacting MYB domain-containing protein. | Putative nuclease HARBI1. | 0.412 |
CKAN_00141400 | CKAN_01226700 | A0A3S3PUN0 | A0A3S3P5J6 | L10-interacting MYB domain-containing protein. | CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1. | 0.431 |
CKAN_00141400 | CKAN_02215300 | A0A3S3PUN0 | A0A443PQ70 | L10-interacting MYB domain-containing protein. | L10-interacting MYB domain-containing-like protein. | 0.480 |
CKAN_00576400 | CKAN_00141400 | A0A443NFL2 | A0A3S3PUN0 | Putative nuclease HARBI1. | L10-interacting MYB domain-containing protein. | 0.412 |
CKAN_01226700 | CKAN_00141400 | A0A3S3P5J6 | A0A3S3PUN0 | CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1. | L10-interacting MYB domain-containing protein. | 0.431 |
CKAN_02215300 | CKAN_00141400 | A0A443PQ70 | A0A3S3PUN0 | L10-interacting MYB domain-containing-like protein. | L10-interacting MYB domain-containing protein. | 0.480 |