Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00396600 | CKAN_00721000 | A0A3S3PZ35 | A0A3S3NFK5 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.699 |
CKAN_00396600 | CKAN_00838400 | A0A3S3PZ35 | A0A3S3Q5N6 | Zinc finger, CCCH-type. | SANT/Myb domain-containing protein. | 0.552 |
CKAN_00396600 | CKAN_01480700 | A0A3S3PZ35 | A0A3S3QJ73 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.946 |
CKAN_00396600 | CKAN_01579200 | A0A3S3PZ35 | A0A3S3PAV2 | Zinc finger, CCCH-type. | ATP-dependent DNA helicase mph1 isoform X1. | 0.544 |
CKAN_00396600 | CKAN_01996500 | A0A3S3PZ35 | A0A443PJB5 | Zinc finger, CCCH-type. | Protein TRANSPORT INHIBITOR RESPONSE 1-like protein. | 0.817 |
CKAN_00396600 | CKAN_02193200 | A0A3S3PZ35 | A0A443PPQ4 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.699 |
CKAN_00396600 | CKAN_02257900 | A0A3S3PZ35 | A0A443PRH6 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.703 |
CKAN_00396600 | CKAN_02338200 | A0A3S3PZ35 | A0A443PTM4 | Zinc finger, CCCH-type. | Protein TRANSPORT INHIBITOR RESPONSE 1. | 0.936 |
CKAN_00396600 | CKAN_02521900 | A0A3S3PZ35 | A0A3S3NWK5 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.834 |
CKAN_00396600 | CKAN_02581900 | A0A3S3PZ35 | A0A443Q081 | Zinc finger, CCCH-type. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.703 |
CKAN_00721000 | CKAN_00396600 | A0A3S3NFK5 | A0A3S3PZ35 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Zinc finger, CCCH-type. | 0.699 |
CKAN_00721000 | CKAN_01480700 | A0A3S3NFK5 | A0A3S3QJ73 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.797 |
CKAN_00838400 | CKAN_00396600 | A0A3S3Q5N6 | A0A3S3PZ35 | SANT/Myb domain-containing protein. | Zinc finger, CCCH-type. | 0.552 |
CKAN_00838400 | CKAN_02521900 | A0A3S3Q5N6 | A0A3S3NWK5 | SANT/Myb domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.655 |
CKAN_01480700 | CKAN_00396600 | A0A3S3QJ73 | A0A3S3PZ35 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Zinc finger, CCCH-type. | 0.946 |
CKAN_01480700 | CKAN_00721000 | A0A3S3QJ73 | A0A3S3NFK5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.797 |
CKAN_01480700 | CKAN_02193200 | A0A3S3QJ73 | A0A443PPQ4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.797 |
CKAN_01480700 | CKAN_02257900 | A0A3S3QJ73 | A0A443PRH6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.539 |
CKAN_01480700 | CKAN_02338200 | A0A3S3QJ73 | A0A443PTM4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Protein TRANSPORT INHIBITOR RESPONSE 1. | 0.434 |
CKAN_01480700 | CKAN_02581900 | A0A3S3QJ73 | A0A443Q081 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.539 |
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