STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00541300Phosphoinositide phospholipase C. (588 aa)    
Predicted Functional Partners:
CKAN_00891500
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
     
 0.906
CKAN_02696400
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
     
 0.906
CKAN_00403900
Death-associated protein kinase 1.
   
 0.892
CKAN_00336600
Phosphatidylinositol-4-phosphate 5-kinase.
    
 0.867
CKAN_00916300
Phosphatidylinositol 4-kinase alpha 1-like protein isoform X1; Belongs to the PI3/PI4-kinase family.
     
 0.857
CKAN_01922300
Phosphatidylinositol 4-phosphate 5-kinase.
    
 0.856
CKAN_02247200
Phosphatidylinositol 4-phosphate 5-kinase 10 isoform X1.
    
 0.856
CKAN_02265200
Uncharacterized protein.
     
 0.842
CKAN_02766500
Dual specificity phosphatase.
    
 0.837
CKAN_02050700
Diacylglycerol kinase.
     
 0.834
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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