Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00241000 | CKAN_00546900 | A0A3S3LZ38 | A0A3S3Q1P0 | Vacuolar fusion protein MON1. | Pentatricopeptide repeat-containing protein isoform X1. | 0.420 |
CKAN_00241000 | CKAN_00548500 | A0A3S3LZ38 | A0A3S3MC02 | Vacuolar fusion protein MON1. | F-box/kelch-repeat-like protein. | 0.432 |
CKAN_00241000 | CKAN_00823600 | A0A3S3LZ38 | A0A3S3Q5E6 | Vacuolar fusion protein MON1. | Uncharacterized protein. | 0.431 |
CKAN_00241000 | CKAN_01007600 | A0A3S3LZ38 | A0A443NS94 | Vacuolar fusion protein MON1. | TIP41-like protein. | 0.512 |
CKAN_00241000 | CKAN_02174600 | A0A3S3LZ38 | A0A443PP76 | Vacuolar fusion protein MON1. | Uncharacterized protein. | 0.493 |
CKAN_00242500 | CKAN_00546900 | A0A443N6I3 | A0A3S3Q1P0 | BHLH family protein. | Pentatricopeptide repeat-containing protein isoform X1. | 0.449 |
CKAN_00243000 | CKAN_00546900 | A0A443N6G6 | A0A3S3Q1P0 | BHLH family protein. | Pentatricopeptide repeat-containing protein isoform X1. | 0.449 |
CKAN_00446700 | CKAN_00546900 | A0A443NC06 | A0A3S3Q1P0 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Pentatricopeptide repeat-containing protein isoform X1. | 0.463 |
CKAN_00446700 | CKAN_02345900 | A0A443NC06 | A0A3S3N1P8 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.993 |
CKAN_00546900 | CKAN_00241000 | A0A3S3Q1P0 | A0A3S3LZ38 | Pentatricopeptide repeat-containing protein isoform X1. | Vacuolar fusion protein MON1. | 0.420 |
CKAN_00546900 | CKAN_00242500 | A0A3S3Q1P0 | A0A443N6I3 | Pentatricopeptide repeat-containing protein isoform X1. | BHLH family protein. | 0.449 |
CKAN_00546900 | CKAN_00243000 | A0A3S3Q1P0 | A0A443N6G6 | Pentatricopeptide repeat-containing protein isoform X1. | BHLH family protein. | 0.449 |
CKAN_00546900 | CKAN_00446700 | A0A3S3Q1P0 | A0A443NC06 | Pentatricopeptide repeat-containing protein isoform X1. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.463 |
CKAN_00546900 | CKAN_00548500 | A0A3S3Q1P0 | A0A3S3MC02 | Pentatricopeptide repeat-containing protein isoform X1. | F-box/kelch-repeat-like protein. | 0.433 |
CKAN_00546900 | CKAN_00823600 | A0A3S3Q1P0 | A0A3S3Q5E6 | Pentatricopeptide repeat-containing protein isoform X1. | Uncharacterized protein. | 0.431 |
CKAN_00546900 | CKAN_01007200 | A0A3S3Q1P0 | A0A443NS85 | Pentatricopeptide repeat-containing protein isoform X1. | E3 ubiquitin-protein ligase UPL7 isoform X1. | 0.431 |
CKAN_00546900 | CKAN_01007600 | A0A3S3Q1P0 | A0A443NS94 | Pentatricopeptide repeat-containing protein isoform X1. | TIP41-like protein. | 0.428 |
CKAN_00546900 | CKAN_02174600 | A0A3S3Q1P0 | A0A443PP76 | Pentatricopeptide repeat-containing protein isoform X1. | Uncharacterized protein. | 0.433 |
CKAN_00546900 | CKAN_02345900 | A0A3S3Q1P0 | A0A3S3N1P8 | Pentatricopeptide repeat-containing protein isoform X1. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.432 |
CKAN_00548500 | CKAN_00241000 | A0A3S3MC02 | A0A3S3LZ38 | F-box/kelch-repeat-like protein. | Vacuolar fusion protein MON1. | 0.432 |
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