STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00701400Annexin. (316 aa)    
Predicted Functional Partners:
CKAN_01801800
Uncharacterized protein.
    
 0.673
CKAN_02339100
Uncharacterized protein.
    
 0.673
CKAN_01442600
Actin-interacting protein 1-2-like protein.
   
 
  0.571
CKAN_01209700
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.560
CKAN_00377000
Filamin/ABP280 repeat-like protein.
    
 0.555
CKAN_02451500
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.
     
 0.541
CKAN_02428900
SNARE-interacting protein KEULE-like protein isoform X2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.533
CKAN_02008800
SNARE-interacting protein KEULE; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.533
CKAN_02009100
SNARE-interacting protein KEULE-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.533
CKAN_02659900
RNA recognition motif domain-containing protein.
    
 0.526
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.