STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01072000WD40 repeat. (316 aa)    
Predicted Functional Partners:
CKAN_00755900
WD40 repeat.
    
 0.999
CKAN_00641600
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.991
CKAN_00585500
Choline/Ethanolamine kinase.
   
 0.990
CKAN_00252700
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.989
CKAN_02732500
Serine/threonine-protein kinase TOR.
    
 0.989
CKAN_02497600
Choline kinase.
   
 0.980
CKAN_02401200
PP2A regulatory subunit TAP46.
    
 0.945
CKAN_01667500
Serine/threonine-protein kinase ATG1a-like protein isoform X2.
    
 0.918
CKAN_02122600
Serine/threonine-protein kinase ATG1c.
    
 0.918
CKAN_00178000
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
 
  
 0.917
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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