STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01089400Subtilisin-like protein protease SBT3.18; Belongs to the peptidase S8 family. (800 aa)    
Predicted Functional Partners:
CKAN_00420900
Chromatin structure-remodeling complex protein SYD-like protein isoform X1.
   
 0.550
CKAN_02533900
Chromatin structure-remodeling complex protein SYD isoform X1.
   
 0.550
CKAN_01345900
Albumin-2 protein.
    
 0.518
CKAN_01560800
Albumin-2-like protein.
    
 0.518
CKAN_02306300
Peptidase M10.
    
 0.518
CKAN_01935300
Metalloendoproteinase 2-MMP-like protein.
    
 0.518
CKAN_02306400
Peptidase M10.
    
 0.518
CKAN_01935200
Metalloendoproteinase 2-MMP-like protein.
    
 0.518
CKAN_00137000
Metalloendoproteinase 2-MMP-like protein.
    
 0.518
CKAN_01639800
Metalloendoproteinase 1-MMP.
    
 0.518
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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