STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01040500Checkpoint protein Rad17/Rad24. (644 aa)    
Predicted Functional Partners:
CKAN_00878700
ATP-dependent DNA helicase RecQ-like protein.
   
 0.994
CKAN_01945000
Checkpoint protein; Belongs to the HUS1 family.
   
 0.994
CKAN_02463600
Cell cycle checkpoint control protein RAD9A isoform X2; Belongs to the rad9 family.
   
 0.988
CKAN_01934600
AAA+ ATPase domain-containing protein.
   
0.985
CKAN_02092300
Serine/threonine-protein kinase ATR isoform X1.
   
 0.985
CKAN_01439000
DDT domain-containing protein.
   
 0.985
CKAN_01843300
Replication factor C subunit 2.
    
 0.985
CKAN_01114000
Replication factor C.
   
 0.961
CKAN_00902800
Replication factor C subunit 3.
   
 0.961
CKAN_00967900
Replication factor C subunit 5.
   
 0.961
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.