STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01175100Histone-lysine N-methyltransferase CLF-like protein isoform X1. (931 aa)    
Predicted Functional Partners:
CKAN_02272400
Polycomb group protein FIE2.
    
 0.985
CKAN_02079000
Putative lysine-specific demethylase ELF6 isoform X1.
   
 0.981
CKAN_01563000
Polycomb group protein EMBRYONIC FLOWER 2 isoform X2.
   
 0.976
CKAN_01882700
Polycomb group protein EMBRYONIC FLOWER 2-like protein isoform X4.
   
 0.976
CKAN_01776900
WD40 repeat.
    
 0.952
CKAN_00193400
WD-40 repeat-containing protein MSI4-like protein.
    
 0.946
CKAN_00080900
WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family.
    
 0.946
CKAN_00193800
WD-40 repeat-containing protein MSI4-like protein.
    
 0.946
CKAN_02501500
SET domain-containing protein.
   
0.935
CKAN_02064200
Histone-lysine N-methyltransferase ASHH2-like protein isoform X2.
     
0.913
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.