STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01208100Methyl-CpG-binding domain-containing protein 9. (2341 aa)    
Predicted Functional Partners:
CKAN_02031400
Testis-expressed sequence 10 protein isoform X2.
    
 0.639
CKAN_00452200
DDT domain-containing protein PTM-like protein.
  
 0.625
CKAN_00216400
Tudor domain-containing protein.
  
   
 0.583
CKAN_00031700
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.574
CKAN_02396600
DDB1-and CUL4-associated factor 1.
  
   
 0.571
CKAN_02501500
SET domain-containing protein.
  
 0.570
CKAN_00119800
Tudor domain-containing protein.
  
   
 0.564
CKAN_02216700
EPS15 EH.
  
 
   0.557
CKAN_00508100
SAC3/GANP/Nin1/mts3/eIF-3 p25.
  
   
 0.549
CKAN_00706500
EPS15 EH.
  
 
   0.547
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.