STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01229200Cell division protein FtsZ. (488 aa)    
Predicted Functional Partners:
CKAN_00992500
Small GTPase superfamily.
   
 0.884
CKAN_01326500
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.814
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.772
CKAN_00848100
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.757
CKAN_00409300
Ras-related protein RHN1 isoform X3.
    
 0.731
CKAN_00878500
Trihelix transcription factor ASR3-like protein.
    
 0.731
CKAN_01762400
Ras-related protein RABF2a.
    
 0.731
CKAN_00709300
Ras-related protein RHN1.
    
 0.731
CKAN_01585500
Trihelix transcription factor ASR3-like protein.
    
 0.731
CKAN_01141000
Trihelix transcription factor ASR3.
    
 0.731
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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