Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00314600 | CKAN_01424500 | A0A443N8F6 | A0A3S3QJG4 | Dihydropyrimidinase. | Protein MON2 isoform X2. | 0.713 |
CKAN_00957600 | CKAN_01424500 | A0A443NQX1 | A0A3S3QJG4 | Ribosome control protein 1. | Protein MON2 isoform X2. | 0.772 |
CKAN_00957600 | CKAN_01833300 | A0A443NQX1 | A0A443PET4 | Ribosome control protein 1. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.834 |
CKAN_00957600 | CKAN_02432600 | A0A443NQX1 | A0A443PW65 | Ribosome control protein 1. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.834 |
CKAN_01031000 | CKAN_01424500 | A0A3S3NKK7 | A0A3S3QJG4 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Protein MON2 isoform X2. | 0.617 |
CKAN_01326500 | CKAN_01424500 | A0A443P0Y5 | A0A3S3QJG4 | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | Protein MON2 isoform X2. | 0.505 |
CKAN_01326500 | CKAN_01833300 | A0A443P0Y5 | A0A443PET4 | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.442 |
CKAN_01326500 | CKAN_02432600 | A0A443P0Y5 | A0A443PW65 | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.442 |
CKAN_01424500 | CKAN_00314600 | A0A3S3QJG4 | A0A443N8F6 | Protein MON2 isoform X2. | Dihydropyrimidinase. | 0.713 |
CKAN_01424500 | CKAN_00957600 | A0A3S3QJG4 | A0A443NQX1 | Protein MON2 isoform X2. | Ribosome control protein 1. | 0.772 |
CKAN_01424500 | CKAN_01031000 | A0A3S3QJG4 | A0A3S3NKK7 | Protein MON2 isoform X2. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.617 |
CKAN_01424500 | CKAN_01326500 | A0A3S3QJG4 | A0A443P0Y5 | Protein MON2 isoform X2. | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | 0.505 |
CKAN_01424500 | CKAN_01424700 | A0A3S3QJG4 | A0A443P3L8 | Protein MON2 isoform X2. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.695 |
CKAN_01424500 | CKAN_01833300 | A0A3S3QJG4 | A0A443PET4 | Protein MON2 isoform X2. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.561 |
CKAN_01424500 | CKAN_02124600 | A0A3S3QJG4 | A0A3S3QZB3 | Protein MON2 isoform X2. | Amidohydrolase 1. | 0.713 |
CKAN_01424500 | CKAN_02377300 | A0A3S3QJG4 | A0A443PUL8 | Protein MON2 isoform X2. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.508 |
CKAN_01424500 | CKAN_02412400 | A0A3S3QJG4 | A0A3S3R3D9 | Protein MON2 isoform X2. | AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles. | 0.501 |
CKAN_01424500 | CKAN_02432600 | A0A3S3QJG4 | A0A443PW65 | Protein MON2 isoform X2. | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | 0.561 |
CKAN_01424700 | CKAN_01424500 | A0A443P3L8 | A0A3S3QJG4 | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Protein MON2 isoform X2. | 0.695 |
CKAN_01833300 | CKAN_00957600 | A0A443PET4 | A0A443NQX1 | Small GTPase superfamily; Belongs to the small GTPase superfamily. Arf family. | Ribosome control protein 1. | 0.834 |
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