STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01433300Filament-like plant protein isoform X1. (674 aa)    
Predicted Functional Partners:
CKAN_00783800
High mobility group B protein 9-like protein isoform X2.
    
 
 0.755
CKAN_01615000
High mobility group B protein 15-like protein isoform X1.
    
 
 0.755
CKAN_01614600
High mobility group B protein 15-like protein isoform X1.
    
 
 0.755
CKAN_02160300
High mobility group B protein 9-like protein isoform X2.
    
 
 0.755
CKAN_02440600
High mobility group B protein 10.
    
 
 0.755
CKAN_01518600
High mobility group B protein 10.
    
 
 0.755
CKAN_00384700
Transcription initiation factor TFIID subunit 5.
    
 0.732
CKAN_02149800
Transformation/transcription domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.727
CKAN_02287500
TATA box binding protein associated factor TAF.
    
 0.707
CKAN_00450700
39S ribosomal protein L46, mitochondrial.
    
   0.658
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.