STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01839100Protein HOTHEAD-like protein. (578 aa)    
Predicted Functional Partners:
CKAN_02015100
Betaine aldehyde dehydrogenase 1, chloroplastic; Belongs to the aldehyde dehydrogenase family.
  
 
 0.899
CKAN_02063600
Choline monooxygenase, chloroplastic isoform X1.
     
 0.892
CKAN_02063700
Choline monooxygenase, chloroplastic isoform X1.
     
 0.892
CKAN_02523600
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.890
CKAN_02016600
Choline/ethanolaminephosphotransferase 1 isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.882
CKAN_00270600
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
     
 0.878
CKAN_01928600
Phosphatidylserine decarboxylase proenzyme 2 isoform X2.
     
 0.877
CKAN_00267700
Phospholipase D/Transphosphatidylase.
     
 0.876
CKAN_00302800
Triacylglycerol lipase SDP1.
    
  0.875
CKAN_00845700
Patatin/Phospholipase A2-related.
    
  0.875
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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