STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01875700Amidophosphoribosyltransferase, chloroplastic-like protein. (641 aa)    
Predicted Functional Partners:
CKAN_01500700
AIR synthase related protein.
  
 0.992
CKAN_02325400
Bifunctional purine biosynthesis protein PurH-like protein isoform X2.
 
 0.992
CKAN_01455400
Urease accessory protein UreD.
  
 0.989
CKAN_02130800
Phosphoribosylglycinamide formyltransferase, chloroplastic.
  
 0.988
CKAN_01764000
Phosphoribosylamine--glycine ligase isoform X1.
 0.988
CKAN_01886100
Formyltetrahydrofolate deformylase 1, mitochondrial isoform X1.
  
 0.988
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.981
CKAN_02437000
Carbamoyl-phosphate synthase large chain, chloroplastic-like protein.
  
 
 0.979
CKAN_02673300
Carbamoyl-phosphate synthase small chain, chloroplastic.
  
 
 0.979
CKAN_01979700
Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial.
 0.973
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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