STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01953700Delta24-sterol reductase. (567 aa)    
Predicted Functional Partners:
CKAN_01140900
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.955
CKAN_02066200
7-dehydrocholesterol reductase.
   
 0.943
CKAN_01254900
Delta14-sterol reductase.
   
 0.940
CKAN_00432300
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.928
CKAN_02312200
Sterol 14-demethylase; Belongs to the cytochrome P450 family.
   
 0.928
CKAN_02506500
Cytochrome P450; Belongs to the cytochrome P450 family.
    
 0.926
CKAN_01815800
Cytochrome P450 710A11; Belongs to the cytochrome P450 family.
    
 0.907
CKAN_00262500
Cytochrome P450 724B1; Belongs to the cytochrome P450 family.
    
  0.877
CKAN_00654900
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
     
 0.874
CKAN_00000800
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
     
 0.874
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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