Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00112600 | CKAN_00217200 | A0A443N306 | A0A3S3PUS4 | DExH-box ATP-dependent RNA helicase DExH9. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.974 |
CKAN_00112600 | CKAN_00312500 | A0A443N306 | A0A3S3ME67 | DExH-box ATP-dependent RNA helicase DExH9. | U3 small nucleolar ribonucleoprotein IMP4. | 0.983 |
CKAN_00112600 | CKAN_00514700 | A0A443N306 | A0A443NDW3 | DExH-box ATP-dependent RNA helicase DExH9. | Exosome complex component RRP43. | 0.991 |
CKAN_00112600 | CKAN_01086400 | A0A443N306 | A0A443NUH3 | DExH-box ATP-dependent RNA helicase DExH9. | Protein RRP6-like protein 2. | 0.995 |
CKAN_00112600 | CKAN_01745700 | A0A443N306 | A0A443PCE4 | DExH-box ATP-dependent RNA helicase DExH9. | Protein RRP6-like protein 3 isoform X2. | 0.995 |
CKAN_00112600 | CKAN_02038900 | A0A443N306 | A0A3S3QVL1 | DExH-box ATP-dependent RNA helicase DExH9. | Nuclear nucleic acid-binding protein C1D. | 0.985 |
CKAN_00112600 | CKAN_02325300 | A0A443N306 | A0A3S3P5R4 | DExH-box ATP-dependent RNA helicase DExH9. | Putative exosome complex component rrp40 isoform X1. | 0.992 |
CKAN_00112600 | CKAN_02469500 | A0A443N306 | A0A443PX52 | DExH-box ATP-dependent RNA helicase DExH9. | Exosome complex component RRP4. | 0.994 |
CKAN_00112600 | CKAN_02535800 | A0A443N306 | A0A3S3R8B2 | DExH-box ATP-dependent RNA helicase DExH9. | Exosome complex exonuclease RRP46. | 0.994 |
CKAN_00112600 | CKAN_02540200 | A0A443N306 | A0A443PZ33 | DExH-box ATP-dependent RNA helicase DExH9. | Exosome complex component CSL4. | 0.994 |
CKAN_00217200 | CKAN_00112600 | A0A3S3PUS4 | A0A443N306 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | DExH-box ATP-dependent RNA helicase DExH9. | 0.974 |
CKAN_00217200 | CKAN_00312500 | A0A3S3PUS4 | A0A3S3ME67 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | U3 small nucleolar ribonucleoprotein IMP4. | 0.998 |
CKAN_00217200 | CKAN_00514700 | A0A3S3PUS4 | A0A443NDW3 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Exosome complex component RRP43. | 0.962 |
CKAN_00217200 | CKAN_01086400 | A0A3S3PUS4 | A0A443NUH3 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Protein RRP6-like protein 2. | 0.992 |
CKAN_00217200 | CKAN_01745700 | A0A3S3PUS4 | A0A443PCE4 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Protein RRP6-like protein 3 isoform X2. | 0.992 |
CKAN_00217200 | CKAN_02038900 | A0A3S3PUS4 | A0A3S3QVL1 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Nuclear nucleic acid-binding protein C1D. | 0.977 |
CKAN_00217200 | CKAN_02325300 | A0A3S3PUS4 | A0A3S3P5R4 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Putative exosome complex component rrp40 isoform X1. | 0.984 |
CKAN_00217200 | CKAN_02469500 | A0A3S3PUS4 | A0A443PX52 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Exosome complex component RRP4. | 0.959 |
CKAN_00217200 | CKAN_02535800 | A0A3S3PUS4 | A0A3S3R8B2 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Exosome complex exonuclease RRP46. | 0.976 |
CKAN_00217200 | CKAN_02540200 | A0A3S3PUS4 | A0A443PZ33 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Exosome complex component CSL4. | 0.985 |
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