Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00497300 | CKAN_01947100 | A0A3S3PZL8 | A0A3S3QVM9 | Thiamine pyrophosphokinase 1 isoform X4. | Nuclear pore complex protein NUP214 isoform X1. | 0.572 |
CKAN_00771700 | CKAN_00897400 | A0A3S3M8V0 | A0A3S3NIG4 | Protein GLE1. | Nuclear pore complex protein NUP1 isoform X1. | 0.933 |
CKAN_00771700 | CKAN_01431800 | A0A3S3M8V0 | A0A3S3QI74 | Protein GLE1. | Nuclear pore complex protein NUP1-like protein isoform X1. | 0.933 |
CKAN_00771700 | CKAN_01672600 | A0A3S3M8V0 | A0A443PAI0 | Protein GLE1. | Nucleoporin Nup120/160. | 0.854 |
CKAN_00771700 | CKAN_01890000 | A0A3S3M8V0 | A0A3S3NL46 | Protein GLE1. | Nucleoporin Nup88. | 0.872 |
CKAN_00771700 | CKAN_01890500 | A0A3S3M8V0 | A0A443PGD9 | Protein GLE1. | Nuclear pore complex protein NUP62. | 0.405 |
CKAN_00771700 | CKAN_01947100 | A0A3S3M8V0 | A0A3S3QVM9 | Protein GLE1. | Nuclear pore complex protein NUP214 isoform X1. | 0.516 |
CKAN_00771700 | CKAN_02033300 | A0A3S3M8V0 | A0A3S3NA48 | Protein GLE1. | DEAD-box ATP-dependent RNA helicase 38. | 0.965 |
CKAN_00771700 | CKAN_02265700 | A0A3S3M8V0 | A0A3S3NEC8 | Protein GLE1. | Protein EXPORTIN 1A. | 0.427 |
CKAN_00897400 | CKAN_00771700 | A0A3S3NIG4 | A0A3S3M8V0 | Nuclear pore complex protein NUP1 isoform X1. | Protein GLE1. | 0.933 |
CKAN_00897400 | CKAN_01672600 | A0A3S3NIG4 | A0A443PAI0 | Nuclear pore complex protein NUP1 isoform X1. | Nucleoporin Nup120/160. | 0.953 |
CKAN_00897400 | CKAN_01890000 | A0A3S3NIG4 | A0A3S3NL46 | Nuclear pore complex protein NUP1 isoform X1. | Nucleoporin Nup88. | 0.953 |
CKAN_00897400 | CKAN_01890500 | A0A3S3NIG4 | A0A443PGD9 | Nuclear pore complex protein NUP1 isoform X1. | Nuclear pore complex protein NUP62. | 0.724 |
CKAN_00897400 | CKAN_01947100 | A0A3S3NIG4 | A0A3S3QVM9 | Nuclear pore complex protein NUP1 isoform X1. | Nuclear pore complex protein NUP214 isoform X1. | 0.546 |
CKAN_00897400 | CKAN_02033300 | A0A3S3NIG4 | A0A3S3NA48 | Nuclear pore complex protein NUP1 isoform X1. | DEAD-box ATP-dependent RNA helicase 38. | 0.563 |
CKAN_00897400 | CKAN_02265700 | A0A3S3NIG4 | A0A3S3NEC8 | Nuclear pore complex protein NUP1 isoform X1. | Protein EXPORTIN 1A. | 0.917 |
CKAN_01069500 | CKAN_01947100 | A0A3S3ME77 | A0A3S3QVM9 | Cyclin-H1-1 isoform X1; Belongs to the cyclin family. | Nuclear pore complex protein NUP214 isoform X1. | 0.543 |
CKAN_01431800 | CKAN_00771700 | A0A3S3QI74 | A0A3S3M8V0 | Nuclear pore complex protein NUP1-like protein isoform X1. | Protein GLE1. | 0.933 |
CKAN_01431800 | CKAN_01672600 | A0A3S3QI74 | A0A443PAI0 | Nuclear pore complex protein NUP1-like protein isoform X1. | Nucleoporin Nup120/160. | 0.960 |
CKAN_01431800 | CKAN_01890000 | A0A3S3QI74 | A0A3S3NL46 | Nuclear pore complex protein NUP1-like protein isoform X1. | Nucleoporin Nup88. | 0.953 |
page 1 of 4