STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02088500Protein PAIR1. (402 aa)    
Predicted Functional Partners:
CKAN_02336600
Type 2 DNA topoisomerase 6 subunit B-like protein isoform X1.
      
 0.516
CKAN_02041000
Protein MULTIPOLAR SPINDLE 1 isoform X1.
      
 0.511
CKAN_00108400
Meiotic recombination protein SPO11-1.
      
 0.506
CKAN_00852900
Protein PRD1 isoform X1.
      
 0.447
CKAN_00852500
Protein PRD1 isoform X1.
      
 0.447
CKAN_01932200
BRCT domain-containing protein.
      
 0.444
CKAN_02533000
Cyclin-SDS; Belongs to the cyclin family.
      
 0.442
CKAN_02221100
Synaptonemal complex protein ZEP1-like protein.
      
 0.441
CKAN_02508700
WD repeat-containing protein VIP3.
      
 0.436
CKAN_02108300
Meiotic recombination protein SPO11-2.
      
 0.432
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.