STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02222000Asparagine synthetase [glutamine-hydrolyzing]. (557 aa)    
Predicted Functional Partners:
CKAN_01585800
Aspartate/glutamate/uridylate kinase.
  
 
 0.929
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.918
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.896
CKAN_01866200
Aspartate carbamoyltransferase 2, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.869
CKAN_01833100
Arginase 1, mitochondrial; Belongs to the arginase family.
    
 0.864
CKAN_01388300
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.850
CKAN_00584000
Aspartate aminotransferase.
   
 
 0.847
CKAN_00565000
Isoaspartyl peptidase/L-asparaginase 1.
     
 0.846
CKAN_02495100
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.843
CKAN_00638200
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.843
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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