STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02130700TF-B3 domain-containing protein. (237 aa)    
Predicted Functional Partners:
CKAN_00478100
Ribosomal protein S10.
   
 0.979
CKAN_01282300
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 0.977
CKAN_00087100
S28 ribosomal protein.
   
 0.969
CKAN_00361700
S28 ribosomal protein.
   
 0.969
CKAN_00910900
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.969
CKAN_01068100
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.969
CKAN_01450500
Ribosomal protein S12/S23.
   
 0.969
CKAN_01797500
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.969
CKAN_01846200
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.969
CKAN_01212700
Ribosomal protein S4/S9.
   
 0.969
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.