STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02296300Mediator of RNA polymerase II transcription subunit 33A isoform X2. (1388 aa)    
Predicted Functional Partners:
CKAN_00848200
Uridine 5'-monophosphate synthase.
  
  
 0.818
CKAN_02124600
Amidohydrolase 1.
  
  
 0.790
CKAN_00314600
Dihydropyrimidinase.
  
  
 0.790
CKAN_00018700
Vesicle transport protein GOT1 isoform X1.
  
  
 0.778
CKAN_01629400
Vesicle transport protein GOT1-like protein.
  
  
 0.778
CKAN_01879900
Vesicle transport protein GOT1-like protein.
  
  
 0.778
CKAN_01866200
Aspartate carbamoyltransferase 2, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
  
 0.758
CKAN_02437000
Carbamoyl-phosphate synthase large chain, chloroplastic-like protein.
  
  
 0.758
CKAN_02673300
Carbamoyl-phosphate synthase small chain, chloroplastic.
  
  
 0.758
CKAN_00814200
Dihydropyrimidine dehydrogenase NADP+, chloroplastic.
  
  
 0.718
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.