STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02246100Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (145 aa)    
Predicted Functional Partners:
CKAN_00478100
Ribosomal protein S10.
  
 0.997
CKAN_01282300
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
  
 0.995
CKAN_01846200
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.993
CKAN_01550300
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.993
CKAN_01212700
Ribosomal protein S4/S9.
  
 0.990
CKAN_00641700
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.988
CKAN_01164000
40S ribosomal protein S11.
  
 0.988
CKAN_02284600
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.988
CKAN_00636700
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.987
CKAN_00606400
40S ribosomal protein S16-like protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.987
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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