Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00158700 | CKAN_00830000 | A0A3S3MGH2 | A0A443NMI6 | Putative polygalacturonase isoform X2; Belongs to the glycosyl hydrolase 28 family. | Alpha-L-arabinofuranosidase 1. | 0.876 |
CKAN_00158700 | CKAN_02348100 | A0A3S3MGH2 | A0A3S3R258 | Putative polygalacturonase isoform X2; Belongs to the glycosyl hydrolase 28 family. | Glycoside hydrolase. | 0.877 |
CKAN_00455400 | CKAN_00478000 | A0A3S3NVT7 | A0A443NCV9 | Pectate lyase. | Pectinesterase. | 0.905 |
CKAN_00455400 | CKAN_01112600 | A0A3S3NVT7 | A0A443NV44 | Pectate lyase. | Putative pectinesterase 11. | 0.906 |
CKAN_00455400 | CKAN_01645500 | A0A3S3NVT7 | A0A443P9U3 | Pectate lyase. | Pectinesterase. | 0.898 |
CKAN_00455400 | CKAN_02348100 | A0A3S3NVT7 | A0A3S3R258 | Pectate lyase. | Glycoside hydrolase. | 0.860 |
CKAN_00455400 | CKAN_02430900 | A0A3S3NVT7 | A0A443PW38 | Pectate lyase. | Pectinesterase. | 0.906 |
CKAN_00478000 | CKAN_00455400 | A0A443NCV9 | A0A3S3NVT7 | Pectinesterase. | Pectate lyase. | 0.905 |
CKAN_00478000 | CKAN_01216800 | A0A443NCV9 | A0A443NY03 | Pectinesterase. | Pectate lyase. | 0.880 |
CKAN_00478000 | CKAN_02348100 | A0A443NCV9 | A0A3S3R258 | Pectinesterase. | Glycoside hydrolase. | 0.879 |
CKAN_00478000 | CKAN_02484800 | A0A443NCV9 | A0A3S3PQ82 | Pectinesterase. | Putative pectate lyase 21. | 0.881 |
CKAN_00830000 | CKAN_00158700 | A0A443NMI6 | A0A3S3MGH2 | Alpha-L-arabinofuranosidase 1. | Putative polygalacturonase isoform X2; Belongs to the glycosyl hydrolase 28 family. | 0.876 |
CKAN_00830000 | CKAN_02332700 | A0A443NMI6 | A0A443PTF3 | Alpha-L-arabinofuranosidase 1. | Polygalacturonase. | 0.878 |
CKAN_00830000 | CKAN_02348100 | A0A443NMI6 | A0A3S3R258 | Alpha-L-arabinofuranosidase 1. | Glycoside hydrolase. | 0.878 |
CKAN_01112600 | CKAN_00455400 | A0A443NV44 | A0A3S3NVT7 | Putative pectinesterase 11. | Pectate lyase. | 0.906 |
CKAN_01112600 | CKAN_01216800 | A0A443NV44 | A0A443NY03 | Putative pectinesterase 11. | Pectate lyase. | 0.880 |
CKAN_01112600 | CKAN_02348100 | A0A443NV44 | A0A3S3R258 | Putative pectinesterase 11. | Glycoside hydrolase. | 0.878 |
CKAN_01112600 | CKAN_02484800 | A0A443NV44 | A0A3S3PQ82 | Putative pectinesterase 11. | Putative pectate lyase 21. | 0.881 |
CKAN_01216800 | CKAN_00478000 | A0A443NY03 | A0A443NCV9 | Pectate lyase. | Pectinesterase. | 0.880 |
CKAN_01216800 | CKAN_01112600 | A0A443NY03 | A0A443NV44 | Pectate lyase. | Putative pectinesterase 11. | 0.880 |
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