STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02407900Cinnamoyl-CoA reductase 1-like protein. (324 aa)    
Predicted Functional Partners:
CKAN_00478100
Ribosomal protein S10.
   
 0.939
CKAN_01282300
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 0.920
CKAN_01846200
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.894
CKAN_01550300
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.894
CKAN_00641700
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.892
CKAN_01797500
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.892
CKAN_01164000
40S ribosomal protein S11.
   
 0.892
CKAN_01975900
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.892
CKAN_01233600
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.890
CKAN_01103800
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.890
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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