STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02413500Cysteine synthase 2 isoform X1. (422 aa)    
Predicted Functional Partners:
CKAN_01661000
Methionine gamma-lyase.
  
 0.983
CKAN_00689400
Cystathionine gamma-synthase 1, chloroplastic.
 
 0.983
CKAN_02305700
Cystathionine beta-lyase, chloroplastic-like protein isoform X1.
 
 0.983
CKAN_02536900
Serine acetyltransferase 2/2.
   
 0.941
CKAN_00703200
Serine acetyltransferase 2-like protein.
   
 0.934
CKAN_02219300
Putative serine acetyltransferase 2 isoform X1.
   
 0.934
CKAN_00296500
Adenosylhomocysteinase.
  
 0.930
CKAN_01606700
Adenosylhomocysteinase.
  
 0.930
CKAN_01464300
Sulfurtransferase.
  
 
 0.925
CKAN_00091000
Nitrite/Sulfite reductase ferredoxin-like domain-containing protein.
  
 
 0.920
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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