STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02782000Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (647 aa)    
Predicted Functional Partners:
CKAN_02507800
4Fe-4S binding domain-containing protein.
  
 0.986
CKAN_01248900
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
  
 0.986
CKAN_02722700
NADH-plastoquinone oxidoreductase subunit 4 chloroplast.
 
 0.985
CKAN_02627700
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.985
CKAN_02779400
NADH-plastoquinone oxidoreductase subunit 7 chloroplast.
  
 0.982
CKAN_02722600
NADH-plastoquinone oxidoreductase subunit 7 chloroplast; Belongs to the complex I 49 kDa subunit family.
  
 0.982
CKAN_00814300
NADH dehydrogenase ubiquinone iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
  
 0.980
CKAN_01517300
Queuosine salvage protein; Involved in salvaging queuosine.
  
 0.980
CKAN_01424700
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
 0.973
CKAN_00075600
NADH dehydrogenase ubiquinone iron-sulfur protein 7, mitochondrial.
  
 0.967
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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