STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02676400Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
CKAN_01637100
BP28.
   
 0.990
CKAN_00565500
Nucleolar protein 14.
   
 0.986
CKAN_00494700
U3 small nucleolar RNA-associated protein 14 A.
   
 0.985
CKAN_00645200
U3 small nucleolar RNA-associated protein 4.
   
 0.984
CKAN_01849200
Protein SLOW WALKER 1.
   
 0.983
CKAN_02508600
Nucleolar protein 6 isoform X1.
   
 0.982
CKAN_01772300
WD40 repeat.
   
 0.976
CKAN_01771900
WD40 repeat.
   
 0.976
CKAN_01182300
WD40 repeat.
   
 0.973
CKAN_02545100
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.970
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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