Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00878700 | CKAN_01436800 | A0A443NNQ7 | A0A443P410 | ATP-dependent DNA helicase RecQ-like protein. | DNA polymerase. | 0.902 |
CKAN_00878700 | CKAN_01605800 | A0A443NNQ7 | A0A3S3NV14 | ATP-dependent DNA helicase RecQ-like protein. | DNA repair protein RAD50. | 0.996 |
CKAN_00878700 | CKAN_02182500 | A0A443NNQ7 | A0A3S3QYF4 | ATP-dependent DNA helicase RecQ-like protein. | Nijmegen breakage syndrome 1 protein isoform X1. | 0.996 |
CKAN_00878700 | CKAN_02741700 | A0A443NNQ7 | A0A3S3RCQ0 | ATP-dependent DNA helicase RecQ-like protein. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.588 |
CKAN_01386300 | CKAN_01425700 | A0A3S3NRF4 | A0A3S3NS30 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.999 |
CKAN_01386300 | CKAN_02741700 | A0A3S3NRF4 | A0A3S3RCQ0 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.402 |
CKAN_01425700 | CKAN_01386300 | A0A3S3NS30 | A0A3S3NRF4 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
CKAN_01425700 | CKAN_02741700 | A0A3S3NS30 | A0A3S3RCQ0 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.412 |
CKAN_01436800 | CKAN_00878700 | A0A443P410 | A0A443NNQ7 | DNA polymerase. | ATP-dependent DNA helicase RecQ-like protein. | 0.902 |
CKAN_01436800 | CKAN_01605800 | A0A443P410 | A0A3S3NV14 | DNA polymerase. | DNA repair protein RAD50. | 0.843 |
CKAN_01436800 | CKAN_02182500 | A0A443P410 | A0A3S3QYF4 | DNA polymerase. | Nijmegen breakage syndrome 1 protein isoform X1. | 0.605 |
CKAN_01436800 | CKAN_02741700 | A0A443P410 | A0A3S3RCQ0 | DNA polymerase. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.428 |
CKAN_01605800 | CKAN_00878700 | A0A3S3NV14 | A0A443NNQ7 | DNA repair protein RAD50. | ATP-dependent DNA helicase RecQ-like protein. | 0.996 |
CKAN_01605800 | CKAN_01436800 | A0A3S3NV14 | A0A443P410 | DNA repair protein RAD50. | DNA polymerase. | 0.843 |
CKAN_01605800 | CKAN_02182500 | A0A3S3NV14 | A0A3S3QYF4 | DNA repair protein RAD50. | Nijmegen breakage syndrome 1 protein isoform X1. | 0.999 |
CKAN_01605800 | CKAN_02741700 | A0A3S3NV14 | A0A3S3RCQ0 | DNA repair protein RAD50. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.437 |
CKAN_02182500 | CKAN_00878700 | A0A3S3QYF4 | A0A443NNQ7 | Nijmegen breakage syndrome 1 protein isoform X1. | ATP-dependent DNA helicase RecQ-like protein. | 0.996 |
CKAN_02182500 | CKAN_01436800 | A0A3S3QYF4 | A0A443P410 | Nijmegen breakage syndrome 1 protein isoform X1. | DNA polymerase. | 0.605 |
CKAN_02182500 | CKAN_01605800 | A0A3S3QYF4 | A0A3S3NV14 | Nijmegen breakage syndrome 1 protein isoform X1. | DNA repair protein RAD50. | 0.999 |
CKAN_02182500 | CKAN_02741700 | A0A3S3QYF4 | A0A3S3RCQ0 | Nijmegen breakage syndrome 1 protein isoform X1. | Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. | 0.422 |
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