STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00081400Uncharacterized protein. (277 aa)    
Predicted Functional Partners:
CKAN_01806100
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 13-B.
   
   0.808
CKAN_02330000
Uncharacterized protein.
    
   0.804
CKAN_00123300
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.700
CKAN_01535800
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.691
CKAN_02580600
Prohibitin.
   
 0.676
CKAN_02657800
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.673
CKAN_00921300
Hypersensitive-induced response protein 1.
   
 0.669
CKAN_01696200
Hypersensitive-induced response protein 1.
   
 0.669
CKAN_01696600
Hypersensitive-induced response protein 2.
   
 0.669
CKAN_01544800
Stomatin-like protein 2, mitochondrial.
   
 0.669
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.