Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00079000 | CKAN_00186500 | A0A443N227 | A0A3S4N790 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | RNA polymerase sigma-70. | 0.595 |
CKAN_00079000 | CKAN_00478100 | A0A443N227 | A0A443NCX6 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribosomal protein S10. | 0.999 |
CKAN_00079000 | CKAN_01282300 | A0A443N227 | A0A443NZU7 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 0.999 |
CKAN_00186500 | CKAN_00079000 | A0A3S4N790 | A0A443N227 | RNA polymerase sigma-70. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.595 |
CKAN_00186500 | CKAN_00318000 | A0A3S4N790 | A0A443N8H6 | RNA polymerase sigma-70. | Aladin isoform X2. | 0.572 |
CKAN_00186500 | CKAN_00478100 | A0A3S4N790 | A0A443NCX6 | RNA polymerase sigma-70. | Ribosomal protein S10. | 0.597 |
CKAN_00186500 | CKAN_00771700 | A0A3S4N790 | A0A3S3M8V0 | RNA polymerase sigma-70. | Protein GLE1. | 0.723 |
CKAN_00186500 | CKAN_01142200 | A0A3S4N790 | A0A443NW17 | RNA polymerase sigma-70. | Nuclear pore complex protein NUP35. | 0.546 |
CKAN_00186500 | CKAN_01219400 | A0A3S4N790 | A0A3S4NYT2 | RNA polymerase sigma-70. | Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.595 |
CKAN_00186500 | CKAN_01282300 | A0A3S4N790 | A0A443NZU7 | RNA polymerase sigma-70. | 40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family. | 0.588 |
CKAN_00186500 | CKAN_01517200 | A0A3S4N790 | A0A3S3N6G2 | RNA polymerase sigma-70. | Nuclear-pore anchor-like protein isoform X3. | 0.556 |
CKAN_00186500 | CKAN_02242000 | A0A3S4N790 | A0A443PR30 | RNA polymerase sigma-70. | Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family. | 0.548 |
CKAN_00186500 | CKAN_02533600 | A0A3S4N790 | A0A3S3PR10 | RNA polymerase sigma-70. | Nuclear pore complex protein NUP155. | 0.541 |
CKAN_00318000 | CKAN_00186500 | A0A443N8H6 | A0A3S4N790 | Aladin isoform X2. | RNA polymerase sigma-70. | 0.572 |
CKAN_00318000 | CKAN_00771700 | A0A443N8H6 | A0A3S3M8V0 | Aladin isoform X2. | Protein GLE1. | 0.853 |
CKAN_00318000 | CKAN_01142200 | A0A443N8H6 | A0A443NW17 | Aladin isoform X2. | Nuclear pore complex protein NUP35. | 0.982 |
CKAN_00318000 | CKAN_01517200 | A0A443N8H6 | A0A3S3N6G2 | Aladin isoform X2. | Nuclear-pore anchor-like protein isoform X3. | 0.904 |
CKAN_00318000 | CKAN_02242000 | A0A443N8H6 | A0A443PR30 | Aladin isoform X2. | Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family. | 0.987 |
CKAN_00318000 | CKAN_02533600 | A0A443N8H6 | A0A3S3PR10 | Aladin isoform X2. | Nuclear pore complex protein NUP155. | 0.991 |
CKAN_00478100 | CKAN_00079000 | A0A443NCX6 | A0A443N227 | Ribosomal protein S10. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.999 |
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