STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00341100Dynein light chain LC6, flagellar outer arm isoform X1. (222 aa)    
Predicted Functional Partners:
CKAN_00191700
Exosome component 10 isoform X2.
    
 
 0.693
CKAN_01891300
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.669
CKAN_00249100
Nuclear pore complex protein NUP58.
    
 
 0.651
CKAN_01378600
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
     
 0.609
CKAN_01845700
Ankyrin-1 isoform X1.
    
 0.601
CKAN_01833100
Arginase 1, mitochondrial; Belongs to the arginase family.
     
 0.599
CKAN_00351900
Protein trichome birefringence.
    
 0.596
CKAN_00364500
Protein trichome birefringence-like protein 5.
    
 0.596
CKAN_00886600
Protein trichome birefringence-like protein 23.
    
 0.596
CKAN_02331500
Protein trichome birefringence-like protein 2.
    
 0.596
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.