STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00343800Putative calcium-binding protein CML25. (189 aa)    
Predicted Functional Partners:
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.871
CKAN_00341700
DNA repair protein RAD4 isoform X1.
    
 0.793
CKAN_02170800
Peptidylprolyl isomerase.
   
 0.750
CKAN_01819100
Two pore calcium channel protein 1 isoform X1.
    
 0.703
CKAN_02770300
Uncharacterized protein.
    
 0.703
CKAN_01845700
Ankyrin-1 isoform X1.
    
 0.668
CKAN_00840800
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
     
 0.666
CKAN_00840600
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
     
 0.666
CKAN_01182900
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.642
CKAN_00589600
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.642
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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