Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00602200 | CKAN_00874700 | A0A443NG82 | A0A3S4NQ62 | Protein GIGANTEA. | Signal transduction response regulator. | 0.943 |
CKAN_00602200 | CKAN_00950200 | A0A443NG82 | A0A3S3MWI2 | Protein GIGANTEA. | Two-component response regulator-like protein APRR5 isoform X1. | 0.627 |
CKAN_00602200 | CKAN_01314000 | A0A443NG82 | A0A3S3N2Q4 | Protein GIGANTEA. | Putative LOV domain-containing protein. | 0.934 |
CKAN_00602200 | CKAN_01314100 | A0A443NG82 | A0A3S3P6T3 | Protein GIGANTEA. | Putative LOV domain-containing protein. | 0.934 |
CKAN_00602200 | CKAN_01666200 | A0A443NG82 | A0A3S3MWR6 | Protein GIGANTEA. | Two-component response regulator-like protein PRR95. | 0.627 |
CKAN_00602200 | CKAN_01860800 | A0A443NG82 | A0A443PFH3 | Protein GIGANTEA. | Two-component response regulator-like protein APRR5 isoform X1. | 0.627 |
CKAN_00602200 | CKAN_02057800 | A0A443NG82 | A0A443PKY9 | Protein GIGANTEA. | Putative LOV domain-containing protein. | 0.934 |
CKAN_00727200 | CKAN_00874700 | A0A443NJM7 | A0A3S4NQ62 | TCP transcription factor. | Signal transduction response regulator. | 0.898 |
CKAN_00874700 | CKAN_00602200 | A0A3S4NQ62 | A0A443NG82 | Signal transduction response regulator. | Protein GIGANTEA. | 0.943 |
CKAN_00874700 | CKAN_00727200 | A0A3S4NQ62 | A0A443NJM7 | Signal transduction response regulator. | TCP transcription factor. | 0.898 |
CKAN_00874700 | CKAN_00950200 | A0A3S4NQ62 | A0A3S3MWI2 | Signal transduction response regulator. | Two-component response regulator-like protein APRR5 isoform X1. | 0.856 |
CKAN_00874700 | CKAN_01314000 | A0A3S4NQ62 | A0A3S3N2Q4 | Signal transduction response regulator. | Putative LOV domain-containing protein. | 0.975 |
CKAN_00874700 | CKAN_01314100 | A0A3S4NQ62 | A0A3S3P6T3 | Signal transduction response regulator. | Putative LOV domain-containing protein. | 0.975 |
CKAN_00874700 | CKAN_01666200 | A0A3S4NQ62 | A0A3S3MWR6 | Signal transduction response regulator. | Two-component response regulator-like protein PRR95. | 0.856 |
CKAN_00874700 | CKAN_01860800 | A0A3S4NQ62 | A0A443PFH3 | Signal transduction response regulator. | Two-component response regulator-like protein APRR5 isoform X1. | 0.856 |
CKAN_00874700 | CKAN_01949800 | A0A3S4NQ62 | A0A443PHZ8 | Signal transduction response regulator. | Transcription factor TCP7-like protein. | 0.926 |
CKAN_00874700 | CKAN_02057800 | A0A3S4NQ62 | A0A443PKY9 | Signal transduction response regulator. | Putative LOV domain-containing protein. | 0.975 |
CKAN_00874700 | CKAN_02183100 | A0A3S4NQ62 | A0A3S4PMX6 | Signal transduction response regulator. | Transcription factor TCP7-like protein. | 0.926 |
CKAN_00950200 | CKAN_00602200 | A0A3S3MWI2 | A0A443NG82 | Two-component response regulator-like protein APRR5 isoform X1. | Protein GIGANTEA. | 0.627 |
CKAN_00950200 | CKAN_00874700 | A0A3S3MWI2 | A0A3S4NQ62 | Two-component response regulator-like protein APRR5 isoform X1. | Signal transduction response regulator. | 0.856 |
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