Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00242300 | CKAN_00947100 | A0A443N6F5 | A0A443NQN4 | E3 ubiquitin-protein ligase RNF6-like protein. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.430 |
CKAN_00242300 | CKAN_01040000 | A0A443N6F5 | A0A3S3P2V1 | E3 ubiquitin-protein ligase RNF6-like protein. | E3 ubiquitin-protein ligase UPL3-like protein. | 0.400 |
CKAN_00242300 | CKAN_01099100 | A0A443N6F5 | A0A3S4NVS4 | E3 ubiquitin-protein ligase RNF6-like protein. | RING-H2 finger protein ATL78. | 0.431 |
CKAN_00242300 | CKAN_01485800 | A0A443N6F5 | A0A3S3N0H9 | E3 ubiquitin-protein ligase RNF6-like protein. | E3 ubiquitin-protein ligase UPL3-like protein. | 0.400 |
CKAN_00242300 | CKAN_01661100 | A0A443N6F5 | A0A3S3PCC1 | E3 ubiquitin-protein ligase RNF6-like protein. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.430 |
CKAN_00242300 | CKAN_01793500 | A0A443N6F5 | A0A443PDQ1 | E3 ubiquitin-protein ligase RNF6-like protein. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.430 |
CKAN_00242300 | CKAN_02489400 | A0A443N6F5 | A0A3S3NAI6 | E3 ubiquitin-protein ligase RNF6-like protein. | E3 ubiquitin-protein ligase UPL4 isoform X1. | 0.421 |
CKAN_00242300 | CKAN_02489600 | A0A443N6F5 | A0A443PXQ1 | E3 ubiquitin-protein ligase RNF6-like protein. | E3 ubiquitin-protein ligase UPL4 isoform X1. | 0.421 |
CKAN_00793300 | CKAN_00947100 | A0A443NLJ4 | A0A443NQN4 | E3 ubiquitin-protein ligase SDIR1. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.430 |
CKAN_00793300 | CKAN_01040000 | A0A443NLJ4 | A0A3S3P2V1 | E3 ubiquitin-protein ligase SDIR1. | E3 ubiquitin-protein ligase UPL3-like protein. | 0.400 |
CKAN_00793300 | CKAN_01099100 | A0A443NLJ4 | A0A3S4NVS4 | E3 ubiquitin-protein ligase SDIR1. | RING-H2 finger protein ATL78. | 0.442 |
CKAN_00793300 | CKAN_01485800 | A0A443NLJ4 | A0A3S3N0H9 | E3 ubiquitin-protein ligase SDIR1. | E3 ubiquitin-protein ligase UPL3-like protein. | 0.400 |
CKAN_00793300 | CKAN_01661100 | A0A443NLJ4 | A0A3S3PCC1 | E3 ubiquitin-protein ligase SDIR1. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.430 |
CKAN_00793300 | CKAN_01793500 | A0A443NLJ4 | A0A443PDQ1 | E3 ubiquitin-protein ligase SDIR1. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.430 |
CKAN_00793300 | CKAN_02489400 | A0A443NLJ4 | A0A3S3NAI6 | E3 ubiquitin-protein ligase SDIR1. | E3 ubiquitin-protein ligase UPL4 isoform X1. | 0.421 |
CKAN_00793300 | CKAN_02489600 | A0A443NLJ4 | A0A443PXQ1 | E3 ubiquitin-protein ligase SDIR1. | E3 ubiquitin-protein ligase UPL4 isoform X1. | 0.421 |
CKAN_00947100 | CKAN_00242300 | A0A443NQN4 | A0A443N6F5 | Ubiquitin-60S ribosomal protein L40-like protein. | E3 ubiquitin-protein ligase RNF6-like protein. | 0.430 |
CKAN_00947100 | CKAN_00793300 | A0A443NQN4 | A0A443NLJ4 | Ubiquitin-60S ribosomal protein L40-like protein. | E3 ubiquitin-protein ligase SDIR1. | 0.430 |
CKAN_00947100 | CKAN_01040000 | A0A443NQN4 | A0A3S3P2V1 | Ubiquitin-60S ribosomal protein L40-like protein. | E3 ubiquitin-protein ligase UPL3-like protein. | 0.777 |
CKAN_00947100 | CKAN_01099100 | A0A443NQN4 | A0A3S4NVS4 | Ubiquitin-60S ribosomal protein L40-like protein. | RING-H2 finger protein ATL78. | 0.430 |
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