STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01680500DUF819 domain-containing protein. (930 aa)    
Predicted Functional Partners:
CKAN_02053700
Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial.
     
 0.675
CKAN_01638600
8-amino-7-oxononanoate synthase.
     
 0.665
CKAN_00015900
Biotin synthase.
     
 0.665
CKAN_01884700
8-amino-7-oxononanoate synthase isoform X1.
     
 0.665
CKAN_02671000
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
     
 0.567
CKAN_01253500
Protein WVD2-like protein 4 isoform X2.
     
 0.567
CKAN_00513800
Uncharacterized protein.
      
 0.439
CKAN_02633000
Serine/threonine protein phosphatase 2A regulatory subunit B' theta isoform.
    
 0.415
CKAN_02145400
Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.415
CKAN_00769800
Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.415
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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