STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01922900Pinin-like protein. (417 aa)    
Predicted Functional Partners:
CKAN_01548500
Histone deacetylase complex subunit SAP18.
    
 0.966
CKAN_01683200
Histone deacetylase complex subunit SAP18.
    
 0.966
CKAN_00698300
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.960
CKAN_02227700
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.960
CKAN_00333600
Serine/threonine-protein kinase prpf4B isoform X1.
   
 0.953
CKAN_01570600
Protein mago nashi.
   
 0.942
CKAN_02177100
Eukaryotic initiation factor 4A-I isoform X2.
    
 0.931
CKAN_02117800
Eukaryotic initiation factor 4A-3.
    
 0.931
CKAN_01878400
Polyadenylate-binding protein 2-like protein isoform X1.
   
 0.921
CKAN_00786700
Polyadenylate-binding protein 2-like protein isoform X1.
   
 0.921
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.