Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00315800 | CKAN_02312400 | A0A3S3PWH4 | A0A3S4PRD2 | Ribonuclease III domain-containing protein RNC1, chloroplastic. | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic. | 0.537 |
CKAN_00315800 | CKAN_02450500 | A0A3S3PWH4 | A0A3S3R6F2 | Ribonuclease III domain-containing protein RNC1, chloroplastic. | CRS2-associated factor 2, chloroplastic. | 0.562 |
CKAN_00508300 | CKAN_02312400 | A0A443NDN9 | A0A3S4PRD2 | Transcription termination factor MTERF4, chloroplastic. | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic. | 0.491 |
CKAN_00508300 | CKAN_02450500 | A0A443NDN9 | A0A3S3R6F2 | Transcription termination factor MTERF4, chloroplastic. | CRS2-associated factor 2, chloroplastic. | 0.488 |
CKAN_00514700 | CKAN_01273200 | A0A443NDW3 | A0A3S3P659 | Exosome complex component RRP43. | mRNA-decapping enzyme subunit 2. | 0.772 |
CKAN_00514700 | CKAN_02004600 | A0A443NDW3 | A0A3S3N9M2 | Exosome complex component RRP43. | Exosome complex component RRP41 isoform X1. | 0.992 |
CKAN_00514700 | CKAN_02312400 | A0A443NDW3 | A0A3S4PRD2 | Exosome complex component RRP43. | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic. | 0.543 |
CKAN_00514700 | CKAN_02325300 | A0A443NDW3 | A0A3S3P5R4 | Exosome complex component RRP43. | Putative exosome complex component rrp40 isoform X1. | 0.999 |
CKAN_00514700 | CKAN_02469500 | A0A443NDW3 | A0A443PX52 | Exosome complex component RRP43. | Exosome complex component RRP4. | 0.999 |
CKAN_00514700 | CKAN_02535800 | A0A443NDW3 | A0A3S3R8B2 | Exosome complex component RRP43. | Exosome complex exonuclease RRP46. | 0.999 |
CKAN_00514700 | CKAN_02540200 | A0A443NDW3 | A0A443PZ33 | Exosome complex component RRP43. | Exosome complex component CSL4. | 0.999 |
CKAN_01273200 | CKAN_00514700 | A0A3S3P659 | A0A443NDW3 | mRNA-decapping enzyme subunit 2. | Exosome complex component RRP43. | 0.772 |
CKAN_01273200 | CKAN_02004600 | A0A3S3P659 | A0A3S3N9M2 | mRNA-decapping enzyme subunit 2. | Exosome complex component RRP41 isoform X1. | 0.824 |
CKAN_01273200 | CKAN_02312400 | A0A3S3P659 | A0A3S4PRD2 | mRNA-decapping enzyme subunit 2. | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic. | 0.652 |
CKAN_01273200 | CKAN_02325300 | A0A3S3P659 | A0A3S3P5R4 | mRNA-decapping enzyme subunit 2. | Putative exosome complex component rrp40 isoform X1. | 0.802 |
CKAN_01273200 | CKAN_02469500 | A0A3S3P659 | A0A443PX52 | mRNA-decapping enzyme subunit 2. | Exosome complex component RRP4. | 0.864 |
CKAN_01273200 | CKAN_02535800 | A0A3S3P659 | A0A3S3R8B2 | mRNA-decapping enzyme subunit 2. | Exosome complex exonuclease RRP46. | 0.870 |
CKAN_01273200 | CKAN_02540200 | A0A3S3P659 | A0A443PZ33 | mRNA-decapping enzyme subunit 2. | Exosome complex component CSL4. | 0.850 |
CKAN_02004600 | CKAN_00514700 | A0A3S3N9M2 | A0A443NDW3 | Exosome complex component RRP41 isoform X1. | Exosome complex component RRP43. | 0.992 |
CKAN_02004600 | CKAN_01273200 | A0A3S3N9M2 | A0A3S3P659 | Exosome complex component RRP41 isoform X1. | mRNA-decapping enzyme subunit 2. | 0.824 |
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