Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00421100 | CKAN_00430300 | A0A443NBB1 | A0A443NBK9 | U1 small nuclear ribonucleoprotein-like protein. | Splicing factor 3B subunit 1. | 0.938 |
CKAN_00421100 | CKAN_00497800 | A0A443NBB1 | A0A443NDD5 | U1 small nuclear ribonucleoprotein-like protein. | Nuclear cap-binding protein subunit 1. | 0.953 |
CKAN_00421100 | CKAN_01540200 | A0A443NBB1 | A0A3S3N1H3 | U1 small nuclear ribonucleoprotein-like protein. | Nuclear cap-binding protein subunit 2. | 0.951 |
CKAN_00421100 | CKAN_01542300 | A0A443NBB1 | A0A3S3NU07 | U1 small nuclear ribonucleoprotein-like protein. | Serine/arginine-rich splicing factor SR34A isoform X1. | 0.855 |
CKAN_00421100 | CKAN_02342800 | A0A443NBB1 | A0A443PTQ3 | U1 small nuclear ribonucleoprotein-like protein. | Putative small nuclear ribonucleoprotein F. | 0.972 |
CKAN_00421100 | CKAN_02395600 | A0A443NBB1 | A0A3S3R547 | U1 small nuclear ribonucleoprotein-like protein. | RNA recognition motif domain-containing protein. | 0.885 |
CKAN_00421100 | CKAN_02412000 | A0A443NBB1 | A0A3S4PTX0 | U1 small nuclear ribonucleoprotein-like protein. | RNA recognition motif domain-containing protein. | 0.641 |
CKAN_00422400 | CKAN_00430300 | A0A443NBE4 | A0A443NBK9 | U1 small nuclear ribonucleoprotein-like protein. | Splicing factor 3B subunit 1. | 0.938 |
CKAN_00422400 | CKAN_00497800 | A0A443NBE4 | A0A443NDD5 | U1 small nuclear ribonucleoprotein-like protein. | Nuclear cap-binding protein subunit 1. | 0.953 |
CKAN_00422400 | CKAN_01540200 | A0A443NBE4 | A0A3S3N1H3 | U1 small nuclear ribonucleoprotein-like protein. | Nuclear cap-binding protein subunit 2. | 0.951 |
CKAN_00422400 | CKAN_01542300 | A0A443NBE4 | A0A3S3NU07 | U1 small nuclear ribonucleoprotein-like protein. | Serine/arginine-rich splicing factor SR34A isoform X1. | 0.855 |
CKAN_00422400 | CKAN_02342800 | A0A443NBE4 | A0A443PTQ3 | U1 small nuclear ribonucleoprotein-like protein. | Putative small nuclear ribonucleoprotein F. | 0.972 |
CKAN_00422400 | CKAN_02395600 | A0A443NBE4 | A0A3S3R547 | U1 small nuclear ribonucleoprotein-like protein. | RNA recognition motif domain-containing protein. | 0.885 |
CKAN_00422400 | CKAN_02412000 | A0A443NBE4 | A0A3S4PTX0 | U1 small nuclear ribonucleoprotein-like protein. | RNA recognition motif domain-containing protein. | 0.641 |
CKAN_00430300 | CKAN_00421100 | A0A443NBK9 | A0A443NBB1 | Splicing factor 3B subunit 1. | U1 small nuclear ribonucleoprotein-like protein. | 0.938 |
CKAN_00430300 | CKAN_00422400 | A0A443NBK9 | A0A443NBE4 | Splicing factor 3B subunit 1. | U1 small nuclear ribonucleoprotein-like protein. | 0.938 |
CKAN_00430300 | CKAN_00497800 | A0A443NBK9 | A0A443NDD5 | Splicing factor 3B subunit 1. | Nuclear cap-binding protein subunit 1. | 0.955 |
CKAN_00430300 | CKAN_01540200 | A0A443NBK9 | A0A3S3N1H3 | Splicing factor 3B subunit 1. | Nuclear cap-binding protein subunit 2. | 0.971 |
CKAN_00430300 | CKAN_01542300 | A0A443NBK9 | A0A3S3NU07 | Splicing factor 3B subunit 1. | Serine/arginine-rich splicing factor SR34A isoform X1. | 0.966 |
CKAN_00430300 | CKAN_02342800 | A0A443NBK9 | A0A443PTQ3 | Splicing factor 3B subunit 1. | Putative small nuclear ribonucleoprotein F. | 0.991 |
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