STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02528700Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (554 aa)    
Predicted Functional Partners:
CKAN_02178700
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
 
 0.995
CKAN_02723200
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic.
 0.995
CKAN_02782800
Acetyl-CoA carboxylase carboxyltransferase beta subunit chloroplast.
 
 0.988
CKAN_02722300
Ribulose-15-bisphosphate carboxylase/oxygenase large subunit chloroplast.
 
 0.983
CKAN_02737600
Ribulose-15-bisphosphate carboxylase/oxygenase large subunit chloroplast.
  
 0.983
CKAN_00883100
Ribulose 1,5 bisphosphate carboxylase-oxygenase chloroplast.
  
 0.983
CKAN_02723300
Ribulose-15-bisphosphate carboxylase/oxygenase large subunit chloroplast.
  
 0.983
CKAN_00286600
Beta-hydroxyacyl-acyl-carrier-protein dehydratase.
  
 
 0.975
CKAN_01260500
2-isopropylmalate synthase A-like protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.975
CKAN_00997500
Acyl transferase.
  
 
 0.966
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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