Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00054900 | CKAN_00806400 | A0A3S3NNZ2 | A0A3S3N2C3 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein 1a. | 0.962 |
CKAN_00054900 | CKAN_00899500 | A0A3S3NNZ2 | A0A3S4NQS3 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | Universal stress protein A. | 0.491 |
CKAN_00054900 | CKAN_02338200 | A0A3S3NNZ2 | A0A443PTM4 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | Protein TRANSPORT INHIBITOR RESPONSE 1. | 0.418 |
CKAN_00054900 | CKAN_02460500 | A0A3S3NNZ2 | A0A443PWX9 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | F-box/LRR-repeat protein 3. | 0.402 |
CKAN_00054900 | CKAN_02490700 | A0A3S3NNZ2 | A0A3S3NW36 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.979 |
CKAN_00054900 | CKAN_02523800 | A0A3S3NNZ2 | A0A443PYR1 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein 1a-like protein. | 0.962 |
CKAN_00054900 | CKAN_02608100 | A0A3S3NNZ2 | A0A3S4PZ56 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | F-box/kelch-repeat-like protein. | 0.551 |
CKAN_00258900 | CKAN_00806400 | A0A3S3NSD0 | A0A3S3N2C3 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein 1a. | 0.962 |
CKAN_00258900 | CKAN_00899500 | A0A3S3NSD0 | A0A3S4NQS3 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | Universal stress protein A. | 0.491 |
CKAN_00258900 | CKAN_02338200 | A0A3S3NSD0 | A0A443PTM4 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | Protein TRANSPORT INHIBITOR RESPONSE 1. | 0.418 |
CKAN_00258900 | CKAN_02460500 | A0A3S3NSD0 | A0A443PWX9 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | F-box/LRR-repeat protein 3. | 0.402 |
CKAN_00258900 | CKAN_02490700 | A0A3S3NSD0 | A0A3S3NW36 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.979 |
CKAN_00258900 | CKAN_02523800 | A0A3S3NSD0 | A0A443PYR1 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein 1a-like protein. | 0.962 |
CKAN_00258900 | CKAN_02608100 | A0A3S3NSD0 | A0A3S4PZ56 | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | F-box/kelch-repeat-like protein. | 0.551 |
CKAN_00806400 | CKAN_00054900 | A0A3S3N2C3 | A0A3S3NNZ2 | RING-box protein 1a. | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | 0.962 |
CKAN_00806400 | CKAN_00258900 | A0A3S3N2C3 | A0A3S3NSD0 | RING-box protein 1a. | NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. | 0.962 |
CKAN_00806400 | CKAN_00899500 | A0A3S3N2C3 | A0A3S4NQS3 | RING-box protein 1a. | Universal stress protein A. | 0.606 |
CKAN_00806400 | CKAN_02338200 | A0A3S3N2C3 | A0A443PTM4 | RING-box protein 1a. | Protein TRANSPORT INHIBITOR RESPONSE 1. | 0.764 |
CKAN_00806400 | CKAN_02460500 | A0A3S3N2C3 | A0A443PWX9 | RING-box protein 1a. | F-box/LRR-repeat protein 3. | 0.621 |
CKAN_00806400 | CKAN_02490700 | A0A3S3N2C3 | A0A3S3NW36 | RING-box protein 1a. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.834 |
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