STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00002300Mitochondrial inner membrane protein Mitofilin; Belongs to the MICOS complex subunit Mic60 family. (635 aa)    
Predicted Functional Partners:
CKAN_00447200
Protein DGS1, mitochondrial isoform X1.
  
   
 0.567
CKAN_01502300
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
      
 0.523
CKAN_02199100
Ubinuclein-1-like protein isoform X4.
  
     0.503
CKAN_00803600
Putative DNA binding protein.
  
     0.487
CKAN_01711700
Protein TONSOKU.
  
     0.472
CKAN_02320500
Mediator of RNA polymerase II transcription subunit 15a isoform X2.
  
     0.470
CKAN_00600900
Uncharacterized protein.
  
     0.469
CKAN_01189700
Protein SABRE.
  
     0.460
CKAN_00414500
Dedicator of cytokinesis C-terminal; Belongs to the DOCK family.
  
     0.456
CKAN_01169600
Exocyst complex component SEC6 isoform X1.
  
     0.451
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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