STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00038500tRNA-specific adenosine deaminase 1 isoform X1. (398 aa)    
Predicted Functional Partners:
CKAN_01174100
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.893
CKAN_01391800
tRNA wybutosine-synthesizing protein 2/3/4 isoform X2.
   
  
 0.720
CKAN_02048600
CMP/dCMP deaminase.
      
 0.528
CKAN_02265900
Adenosine deaminase-like protein isoform X1.
      
 0.527
CKAN_01090700
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
      
 0.515
CKAN_00611300
Cytidine deaminase 1-like protein.
      
 0.514
CKAN_00650200
Sulfhydryl oxidase.
      
 0.509
CKAN_01297800
tRNA guanine10-N2-methyltransferase.
      
 0.504
CKAN_02572800
TPR repeat-containing thioredoxin TTL1-like protein.
    
 
 0.494
CKAN_02690000
TPR repeat-containing thioredoxin TTL1-like protein.
    
 
 0.494
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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