STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00060500GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (221 aa)    
Predicted Functional Partners:
CKAN_02524800
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.988
CKAN_02302500
RAN GTPase-activating protein 2.
   
 0.982
CKAN_02265700
Protein EXPORTIN 1A.
   
 0.978
CKAN_02467000
Protein HASTY 1 isoform X1.
   
 0.978
CKAN_00868800
Transportin-1 isoform X1.
   
 0.957
CKAN_00127100
Importin beta-like protein SAD2.
   
 0.953
CKAN_01001400
Ran-binding protein 1 b-like protein.
   
 0.940
CKAN_01177900
Ran binding domain-containing protein.
   
 0.940
CKAN_02219400
Protein GRIP isoform X1.
   
 0.940
CKAN_00599100
Ran binding domain-containing protein.
   
 0.940
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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