Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00058900 | CKAN_00307100 | A0A443N1J6 | A0A3S3N8H9 | Chloroplast thylakoid membrane. | Saccharopine dehydrogenase isoform 2. | 0.445 |
CKAN_00058900 | CKAN_00509100 | A0A443N1J6 | A0A443NDT8 | Chloroplast thylakoid membrane. | Mog1/PsbP, alpha/beta/alpha sandwich. | 0.433 |
CKAN_00058900 | CKAN_02507100 | A0A443N1J6 | A0A3S3NNP7 | Chloroplast thylakoid membrane. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.445 |
CKAN_00058900 | CKAN_02620900 | A0A443N1J6 | A0A443Q1A6 | Chloroplast thylakoid membrane. | Trigger factor. | 0.471 |
CKAN_00307100 | CKAN_00058900 | A0A3S3N8H9 | A0A443N1J6 | Saccharopine dehydrogenase isoform 2. | Chloroplast thylakoid membrane. | 0.445 |
CKAN_00307100 | CKAN_02620900 | A0A3S3N8H9 | A0A443Q1A6 | Saccharopine dehydrogenase isoform 2. | Trigger factor. | 0.444 |
CKAN_00509100 | CKAN_00058900 | A0A443NDT8 | A0A443N1J6 | Mog1/PsbP, alpha/beta/alpha sandwich. | Chloroplast thylakoid membrane. | 0.433 |
CKAN_00509100 | CKAN_02620900 | A0A443NDT8 | A0A443Q1A6 | Mog1/PsbP, alpha/beta/alpha sandwich. | Trigger factor. | 0.719 |
CKAN_02507100 | CKAN_00058900 | A0A3S3NNP7 | A0A443N1J6 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Chloroplast thylakoid membrane. | 0.445 |
CKAN_02620900 | CKAN_00058900 | A0A443Q1A6 | A0A443N1J6 | Trigger factor. | Chloroplast thylakoid membrane. | 0.471 |
CKAN_02620900 | CKAN_00307100 | A0A443Q1A6 | A0A3S3N8H9 | Trigger factor. | Saccharopine dehydrogenase isoform 2. | 0.444 |
CKAN_02620900 | CKAN_00509100 | A0A443Q1A6 | A0A443NDT8 | Trigger factor. | Mog1/PsbP, alpha/beta/alpha sandwich. | 0.719 |