STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00073800Serine/threonine-protein kinase Aurora-1; Belongs to the protein kinase superfamily. (294 aa)    
Predicted Functional Partners:
CKAN_01902500
Kinetochore protein ndc80.
   
 
 0.967
CKAN_02632200
Mitotic spindle checkpoint protein MAD2.
   
 0.944
CKAN_02181500
Zinc finger protein.
   
 0.940
CKAN_00924600
MND1-interacting protein 1-like protein.
   
 0.940
CKAN_01633100
Zinc finger protein.
   
 0.940
CKAN_02402800
Putative E3 ubiquitin-protein ligase RF298 isoform X1.
   
 0.940
CKAN_00845300
Ubiquitin-conjugating enzyme E2 19; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.921
CKAN_00303500
Ubiquitin-conjugating enzyme E2 20-like protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.921
CKAN_00303600
Ubiquitin-conjugating enzyme E2 20; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.921
CKAN_01172400
Microtubule-associated protein RP/EB family member 1C-like protein.
   
 0.898
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.