STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00112300Glycerophosphodiester phosphodiesterase GDPD6-like protein. (390 aa)    
Predicted Functional Partners:
CKAN_00585500
Choline/Ethanolamine kinase.
    
 0.884
CKAN_02497600
Choline kinase.
    
 0.884
CKAN_00001400
Carboxylesterase SOBER1-like protein.
    
 0.878
CKAN_01146500
Inorganic pyrophosphatase 1.
     
 0.832
CKAN_00075100
Inorganic pyrophosphatase 1.
     
 0.832
CKAN_00664000
Inorganic pyrophosphatase 2.
     
 0.832
CKAN_00279100
Glycerophosphoryl diester phosphodiesterase.
     
 0.821
CKAN_02752800
Glycerophosphoryl diester phosphodiesterase.
     
 0.821
CKAN_00868700
Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like protein.
     
 0.821
CKAN_01590100
Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like protein.
     
 0.821
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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