STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00180200Peptidase S16. (620 aa)    
Predicted Functional Partners:
CKAN_01779500
DNA damage-binding protein 1.
    
 
 0.934
CKAN_01049900
Cullin-4-like protein isoform X1; Belongs to the cullin family.
    
 
 0.859
CKAN_00806400
RING-box protein 1a.
    
 
 0.796
CKAN_02523800
RING-box protein 1a-like protein.
    
 
 0.796
CKAN_01106400
Translation elongation factor EF1A/initiation factor IF2gamma family protein isoform 1.
    
 
 0.794
CKAN_00189200
Translation elongation factor EF1A/initiation factor IF2gamma family protein isoform 1.
    
 
 0.794
CKAN_02267900
Magnesium transporter protein 1.
    
   0.757
CKAN_02504900
COP9 signalosome complex subunit 4.
    
 
 0.745
CKAN_00024900
COP9 signalosome complex subunit 3.
    
 
 0.743
CKAN_02647800
COP9 signalosome complex subunit 8 isoform X1.
    
 
 0.737
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.